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Control of biological processes
Par Efe Ilker (Max Planck Institute for the Physics of Complex Systems, Dresden)
Le 22 Mars 2022 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Time is a major constraint for life. Biological systems need to adapt and respond accurately to the changes in their environment. Having fine-grained control in nonequilibrium processes via external ...
Context-dependent selectivity to natural scenes in the retina
Par Ulisse Ferrari and Olivier Marre (Institut de la Vision, Paris)
Le 15 Mars 2022 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Retina ganglion cells extract specific features from natural scenes and send this information to the brain. In particular, they respond to local light increase (ON responses), and/or decrease (OFF). ...
TBA
Par Internal seminar
Le 8 Mars 2022 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
TBA
Active mechanical and electrohydraulic properties of tissues
Par Charlie Duclut (MSC, Université de Paris)
Le 22 Février 2022 à 11h00 - salle de séminaires 5ème étage, Tour 32-33
Tissues are assemblies of large numbers of cells, which form a soft active material. Their dynamics are governed by chemical signals between cells, which both coordinate active mechanical processes ...
internal seminar
Par internal seminar
Le 18 Janvier 2022 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
internal seminar
Statistical mechanics for the analysis of immunogenic motives in SARS-COv2 sequences and beyond
Par Simona Cocco (LPENS Paris)
Le 11 Janvier 2022 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
When a virus enters a new host, it can present pathogen-associated molecular patterns (PAMPs) that are rarely seen in circulating strains that have adapted to that host’s immune environment over...
HDR : Mechanical properties of tissues and mechanosensitivy : a biomimetic approach
Par Lea-Laëtita Pontani
Le 14 Décembre 2021 à 14h00 - salle de séminaire du LJP, 5e étage, couloir 32-33
HDR
A multiscale chemotaxis assay to unravel how motile bacteria navigate their environment(s)
Par Marianne Grognot (ESPCI Paris)
Le 8 Décembre 2021 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Flagellated bacteria swim by rotating one or several flagella; motility alone results in a random walk, but the flagella’s rotation can be influenced by an intracellular sensory system that ...
Spontaneous propulsion of an isotropic colloid in a phase-separating environment
Par Pierre Illien (Sorbonne U)
Le 7 Décembre 2021 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
The motion of active colloids is generally achieved through their anisotropy, as exemplified by Janus colloids. Recently, there was a growing interest in the propulsion of isotropic colloids, ...
Buckling and curling of epithelial monolayers
Par Jonathan Fouchard (IBPS)
Le 30 Novembre 2021 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Epithelial monolayers are soft thin sheets which shape the body and organs of many multi-cellular organisms. Competition between stretching and bending characterizes shape transitions of thin elastic ...
Seasonal influenza viruses: Limited predictability of evolution & Inference of reassortment networks
Par Pierre Barrat-Charlaix (Univ. Basel)
Le 23 Novembre 2021 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Seasonal influenza viruses repeatedly infect humans in part because they rapidly change their antigenic properties and evade host immune responses, necessitating frequent updates of the vaccine ...
Making and Folding Colloidomers
Par Jasna Brujic (NYU)
Le 9 Novembre 2021 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Making and Folding Colloidomers By Design Angus McMullen, Maitane Munoz Basagoiti, Zorana Zeravcic, Jasna Brujic Protein folding is an efficient mechanism used by biology to make molecules with a ...
internal seminar
Par Nicolas Escoubet & Nabil-Bey Baroudi
Le 19 Octobre 2021 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
internal seminar
Séminaire interne
Par Yuliia Vyborna / Natalia Belén Beiza Canelo
Le 18 Mai 2021 à 16h00 - Salle de séminaires 5ème étage, Tour 32-33
TBA
Motility regulation of run-and-tumble bacteria: from directed to self-organization
Par Julien Tailleur
Le 13 Avril 2021 à 16h00 - Salle de séminaires 5ème étage, Tour 32-33
Equilibrium statistical mechanics tells us how to control the self-assembly of passive materials by tuning the competition between energy and entropy to achieve desired states of organization. Out of ...
Deconstructing human nervous system development in health and disease : an embryoid and organoid perspective
Par Stéphane Nedelec (IFM)
Le 6 Avril 2021 à 16h00 - Salle de séminaires 5ème étage, Tour 32-33
Our lab is studying the molecular and cellular basis of human nervous system development in health and disease. We seek to decode the principles controlling the specification and organization of ...
Séminaire interne
Par Darka Labavic / Julie Lafaye
Le 16 Mars 2021 à 16h00 - Salle de séminaires 5ème étage, Tour 32-33
TBA
Mesodermal growth and morphogenesis in chicken embryos
Par Karine Guevorkian (Institut Curie)
Le 9 Mars 2021 à 16h00 - Salle de séminaires 5ème étage, Tour 32-33
The life of an embryo starts as a ball of undifferentiated cells. Gradually, biochemical signals, in concert with mechanical cues, pattern the embryonic tissues from which organs emerge. Understanding...
Modelling Immune Recognition with Restricted Boltzmann Machines
Par Barbara Bravi (LPENS)
Le 15 Décembre 2020 à 16h00 - Zoom
The immune response of an organism when it is infected by a pathogen is based on the recognition of small portions of its proteins. This raises two questions: what protein portions are relevant to ...
Chirality and non-reciprocal interactions: Creating new liquid crystals from activity
Par Ananyo Maitra (Laboratoire Jean Perrin)
Le 8 Décembre 2020 à 15h00 - Zoom
Active matter theories generally augment descriptions of passive liquid crystals with nonequilibrium forces and currents, thereby addressing how activity affects these structures. In this talk, I will...
Understanding the mechanics of coordinated tissue movements in zebrafish gastrulation
Par Silvia Grigolon (Laboratoire Jean Perrin)
Le 1 Décembre 2020 à 16h00 - Zoom
Embryo morphogenesis relies on highly coordinated movements of different tissues as well as cell differentiation and patterning. However, remarkably little is known about how tissues coordinate their ...
Spatio-temporal patterning of living cells with extracellular DNA programs
Par Marc Van Der Hofstadt (Laboratoire Jean Perrin)
Le 24 Novembre 2020 à 11h00 - Zoom
The microenvironment surrounding eukaryotic cells in complex organisms is constantly evolving. Its out-of-equilibrium behaviour is due to the perpetual production and degradation of its constituents ...
Eukaryotic cells as interacting living particles
Par Joseph d’Alessandro (Institut Jacques Monod, Paris)
Le 17 Novembre 2020 à 11h00 - Zoom
Cells move. They propel themselves using an internal machinery which endows them with the characteristics of active particles. At the same time, they interact dynamically with their environment and ...
Fluid pumping, lumen nucleation and electro-hydraulic phenomena in cell assemblies
Par Charlie Duclut (Max Planck, Dresden)
Le 10 Novembre 2020 à 11h00 - Zoom
In addition to generating forces and reacting to mechanical cues, cell assemblies and tissues are characterized by their capacity to actively pump fluid, thanks to active ion transport. By pumping ...
Single-molecule analysis of multicomponent DNA repair pathways
Par Terence Strick (ENS)
Le 10 Mars 2020 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
DNA repair is typically a multi-step, multi-component process in which proteins detect a DNA lesion; confirm the presence of the lesion; excise the lesion; and replace the excised DNA with ...
Seminaire Interne
Par Hugo Trentesaux / Aurore Woller
Le 3 Mars 2020 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
TBA
Linking lineage and population observables in growing cell populations
Par David Lacoste (ESPCI)
Le 25 Février 2020 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
The question of how a cell controls its size is an one, which despite decades of research is still timely because the old experiments have been unable to measure the heterogeneity of cell populations ...
Microfabricated tools to study embryonic patterning in vitro
Par Benoît Sorre (MSC)
Le 4 Février 2020 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
One of the most striking features of embryonic development is that differentiation is happening in a spatially ordered fashion: tissue self-organize to form well-defined patterns that pre-figure the ...
Natural selection of compartmentalized autocatalytic chemical reactions
Par Philippe Nghe (ESPCI)
Le 21 Janvier 2020 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Natural selection, the differential reproduction and survival (differential fitness) of individuals due to differences in phenotype, is an essential component of evolution in biological systems. ...
Emerging order, from crystals of colloids to fish schools
Par Sophie Ramananarivo (LadHyX Polytechnique)
Le 7 Janvier 2020 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Living systems constantly exploit active fluctuations in their processes, to boost transport or assist assembly. Self-propelled colloids, that consume energy to move hold the same potential for ...
Modelling and predicting antigen presentation with Restricted Boltzmann Machines
Par Barbara Bravi (ENS)
Le 17 Décembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Immune recognition of infected and malignant cells requires presentation on their surface of antigens (i.e. short peptides) by human leukocyte antigen class I (HLA-I) proteins, which are coded by one ...
Soft Matter for the Origin of Life: Liquid Crystals, Phase Transitions and the Prebiotic Emergence of Biopolymers
Par Tommaso P. Fraccia (IPGG - ESPCI)
Le 12 Décembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
The abiotic formation of biopolymers from their monomeric building blocks and the emergence of cellular structures are still unsolved problems in the origin of life investigation. In this frame soft ...
Retinal computations and circuits integrating contextual information
Par Olivier Marre (Institut de la vision)
Le 10 Décembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
At the retinal output, a common assumption is that ganglion cells of a single type extract a single stimulus feature from the visual scene to form a feature map. Yet they can also respond to very ...
Can a population targeted by an artificial gene drive be rescued?
Par Florence Débarre (Sorbonne Université)
Le 3 Décembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Gene drive, a type of genetic control, consists in using selfish genetic elements to modify or eradicate populations. The idea is not new, but has only recently become feasible, thanks to the ...
Cytoskeletal crosstalk during cell migration
Par Sandrine Etienne-Manneville (Pasteur)
Le 26 Novembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Cell migration requires a dramatic and coordinated reorganization of the different elements of the cytoplasmic cytoskeleton, composed of three types of filamentous structures: actin microfilaments, ...
Deep learning driven model discovery in biology and physics
Par Remy Kusters (CRI)
Le 19 Novembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
As scientific data sets become richer and increasingly complex, machine learning (ML) tools become more useful and widely applied. Discovering a mechanistic model, rather than predicting the outcome ...
Formation and functionalization of cellular lipid droplets
Par Abdou Rachid Thiam (ENS)
Le 12 Novembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
A key feature of cell survival is the ability to synchronously respond to environmental energy fluctuations. Excess energy is stored by cells in neutral lipid oil forms such as triglycerides and ...
Nonlinear dynamics of chemically active microdrops grants an insight into interfacial chemistry
Par Matvey Morozov (Université Libre de Bruxelles)
Le 4 Novembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
A chemically active microdrop that is suspended in the bulk of a reagent solution is an example of a non-equilibrium physicochemical system akin to cells and vesicles. Owing to their non-equilibrium ...
Superinfection and cure of infected cells as mechanisms for hepatitis C virus adaptation and persistence
Par Ruian Ke (Los Alamos)
Le 18 Octobre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
RNA viruses exist as a genetically diverse quasispecies with extraordinary ability to adapt to abrupt changes in the host environment. However, the molecular mechanisms that contribute to their rapid ...
Perception de la texture en bouche : une approche biomimétique
Par Jean-Baptiste Thomazo
Le 8 Octobre 2019 à 14h00 - Amphithéâtre Durand
Le système langue-palais est capable de détecter de fines variations de texture en bouche là où le meilleur des rhéomètres est essentiellement aveugle. Une ...
The mechanobiology of vascular colonization by Neisseria meningitidis
Par Daria Bonazzi (Pasteur)
Le 8 Octobre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
During human meningococcal infections, bacteria adhere to the endothelium, accumulate in the form of aggregates and finally fill up blood vessels, causing severe diseases such as septicemia and ...
Spontaneous shape transitions of active matter
Par Anne Bernheim-Groswasser (Ben Gurion University)
Le 4 Octobre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Shape transitions in developing organisms can be driven by active stresses, notably, active contractility generated by myosin motors. The mechanisms generating tissue folding are typically studied in ...
Sinister Self-Assembly - Colloidal Architecture Using DNA Origami
Par Matan Ben Zion (ESPCI)
Le 1 Octobre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Self-assembly and self-organization are two big challenges in natural sciences. What are the rules governing the emergence of greater structures from unassuming individuals? Does statistical ...
Séminaire interne
Par Shunichi Kashida/Guillaume Le Goc
Le 24 Septembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
TBA
Bottom up synthetic cellularity
Par Dora Tang (Max Plank Institute for Cellular Molecular Biology and Genetics, Dresden)
Le 6 Septembre 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Living cells are well equipped in exploiting a large number of out of equilibrium processes to support life. A complete understanding of these mechanisms is still in its infancy due to the complexity ...
Réaliser le bilan carbone d'un laboratoire de recherche: retour d'expérience
Par Xavier Capet (L'OCEAN)
Le 10 Juillet 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
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Robustness in minimal models of biochemical oscillators
Par Clara del Junco (University of Chicago)
Le 2 Juillet 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Biochemical oscillations are ubiquitous in biology and allow organisms to properly time their biological functions. In this talk, I will discuss minimal Markov state models of non-equilibrium ...
Optical Trapping in zebrafish
Par Itia Favre Bulle (The University of Queensland, Australia)
Le 25 Juin 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
This talk will give you an overview of the use of Optical Tweezers in biology, and more specifically in zebrafish and its vestibular system. Otoliths, or ear-stones, play an important role in ...
Quantitative cell biology patchwork: studies of cell volume regulation, dynamics and mechanics of the cell cortex, deformation of the cell nucleus and cell migration
Par Matthieu Piel (Institut Curie)
Le 18 Juin 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Quantitative cell biology patchwork: studies of cell volume regulation, dynamics and mechanics of the cell cortex, deformation of the cell nucleus and cell migration ...
Mobilité de Saffman-Delbrück et particules colloidales en phase lamellaire
Par Jean-Baptiste Fournier (MSC, Paris-Diderot)
Le 11 Juin 2019 à 11h00 - Salle de séminaires 5ème étage, Tour 32-33
Dans une première partie, je discuterai comment obtenir de façon approchée mais simple la loi de Saffman-Delbrück, c'est-à-dire la mobilité (vitesse / force ...

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